PromoterCAD

Developmental Genomic (AtGenExpress + PPDB promoter motif) normalized

Normalized Expression Data of AtGenExpress plant developmental tissues, combined with LDSS sequence analysis of regulatory (8mer) motif calculations (PPDB).

References (for PPDB):
http://www.ncbi.nlm.nih.gov/pubmed/17947329
http://www.ncbi.nlm.nih.gov/pubmed/17346352
References (for AtGenExpress)
http://www.ncbi.nlm.nih.gov/pubmed/15806101

Descriptions for each data table:

AtGenExpress_PPDB_Flowering_normalize	This collection of Gene Expression Properties are associated with flowering tissues.
AtGenExpress_PPDB_Fruit_Seeds_normalize	This collection of Gene Expression Properties are associated with fruit and seed tissues.
AtGenExpress_PPDB_Leaf_normalize	This collection of Gene Expression Properties are associated with leaf tissues.
AtGenExpress_PPDB_Root_normalize	This collection of Gene Expression Properties are associated with root tissues.
AtGenExpress_PPDB_Seedling_normalize	This collection of Gene Expression Properties are associated with seedling tissues.
AtGenExpress_PPDB_Stem_normalize	This collection of Gene Expression Properties are associated with stem tissues.
AtGenExpress_PPDB_Whole_Plant_normalize	This collection of Gene Expression Properties are associated with whole plant body parts.

License

We would like to thank Dr. Yoshiharu Yamamoto for supplying the data of PPDB (Plant Promoter Database) for PromoterCAD & GenoCon2 competition. License of this work's data is according to the intentions of the PPDB original data source.
http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/license.cgi

value

useful

Select a file name to see the detais.

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#LINK
#lang	en
#attribution_name	GenoCon
#attribution_url	http://promotercad.org
#file_name	AtGenExpress_PPDB_Root_normalize
#download_from	http://linkdata.org/work/rdf1s707i
#namespace	ATTED	http://atted.jp/data/locus/
#namespace	Gene	http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace	OctamerElement	http://linkdata.org/work/rdf1s329i/Octamer_elements.html#
#namespace	PLACE	http://www.dna.affrc.go.jp/sigscan/disp.cgi?
#namespace	PPDB	http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace	TAIR	http://arabidopsis.org/servlets/TairObject?type=locus&name=
#namespace	genome_version	http://www.arabidopsis.org/portals/genAnnotation/gene_structural_annotation/
#property	PPDB motif	motif type	motif sequence	motif position	genome_version:annotation_data.jsp	label:Col-0_root17	label:Col-0_root_MS1	label:Col-0_root_GM-8	label:Col-0_root_GM5-8	label:Col-0_root_GM-21	label:Col-0_root_GM5-21
#object_type_xsd	string	string	string	string	string	string	string	string	string	string	string
#property_context	Assertion	Assertion	Assertion	Assertion	Assertion	Assertion	Assertion	Assertion	Assertion	Assertion	Assertion
Gene:AT1G01010	OctamerElement:AtREG514 \| OctamerElement:AtREG519	REG	TCGGTTTA \| CGGTTTAC	209.5 \| 208.5	TAIR9	0.6509	0.9136	0.9225	0.8765	1.1370	1.0022
Gene:AT1G01010	OctamerElement:AtREG473 \| OctamerElement:AtREG412 \| OctamerElement:AtREG521	REG	TTAAACCG \| TAAACCGG \| AAACCGGA	129.5 \| 128.5 \| 127.5	TAIR9	0.6509	0.9136	0.9225	0.8765	1.1370	1.0022
Gene:AT1G01010	OctamerElement:AtREG626	REG	AAACGCTG	63.5	TAIR9	0.6509	0.9136	0.9225	0.8765	1.1370	1.0022
Gene:AT1G01060	OctamerElement:AtREG623	REG	ATACCCTT	130.5	TAIR9	-1.9673	-1.5106	-1.5360	-1.5194	-1.4311	-1.4304
Gene:AT1G01060	OctamerElement:AtREG478 \| OctamerElement:AtREG366 \| OctamerElement:AtREG382 \| OctamerElement:AtREG544	REG	ACGTGTCG \| CACGTGTC \| CCACGTGT \| ACCACGTG	167.5 \| 168.5 \| 169.5 \| 170.5	TAIR9	-1.9673	-1.5106	-1.5360	-1.5194	-1.4311	-1.4304
Gene:AT1G01070	OctamerElement:AtREG462	REG	GGGCTTAT	68.5	TAIR9	0.0892	-0.0009	-0.6823	-0.5813	-0.5217	0.0316
Gene:AT1G01080	OctamerElement:AtREG375 \| OctamerElement:AtREG442 \| OctamerElement:AtREG405 \| OctamerElement:AtREG390 \| OctamerElement:AtREG617	REG	CCGACCCG \| CCCGACCC \| ACCCGACC \| GACCCGAC \| TGACCCGA	43.5 \| 44.5 \| 45.5 \| 46.5 \| 47.5	TAIR9	-3.1683	-2.8154	-3.0921	-3.0212	-3.0467	-3.0872
Gene:AT1G01080	OctamerElement:AtREG459 \| OctamerElement:AtREG359 \| OctamerElement:AtREG353 \| OctamerElement:AtREG356 \| OctamerElement:AtREG373	REG	GGCCTTTT \| GGGCCTTT \| TGGGCCTT \| TTGGGCCT \| TTTGGGCC	144.5 \| 145.5 \| 146.5 \| 147.5 \| 148.5	TAIR9	-3.1683	-2.8154	-3.0921	-3.0212	-3.0467	-3.0872
Gene:AT1G01080	OctamerElement:AtREG437 \| OctamerElement:AtREG490 \| OctamerElement:AtREG361 \| OctamerElement:AtREG643	REG	TGGGCCAT \| ATGGGCCA \| AATGGGCC \| GAATGGGC	285.5 \| 286.5 \| 287.5 \| 288.5	TAIR9	-3.1683	-2.8154	-3.0921	-3.0212	-3.0467	-3.0872
Gene:AT1G01090	OctamerElement:AtREG523	REG	GTGGGTCC	90.5	TAIR9	-0.4280	-0.2786	-0.4448	-0.3223	-0.9521	-1.1249
Gene:AT1G01100	OctamerElement:AtREG635 \| OctamerElement:AtREG403 \| OctamerElement:AtREG380	REG	GCCCATCA \| GGCCCATC \| CGGCCCAT	59.5 \| 60.5 \| 61.5	TAIR9	0.2992	0.0204	-0.2718	-0.3565	-0.2231	-0.2893
Gene:AT1G01100	OctamerElement:AtREG475 \| OctamerElement:AtREG358 \| OctamerElement:AtREG354 \| OctamerElement:AtREG361 \| OctamerElement:AtREG386	REG	GGGCCTAG \| TGGGCCTA \| ATGGGCCT \| AATGGGCC \| AAATGGGC	81.5 \| 82.5 \| 83.5 \| 84.5 \| 85.5	TAIR9	0.2992	0.0204	-0.2718	-0.3565	-0.2231	-0.2893
Gene:AT1G01100	OctamerElement:AtREG355 \| OctamerElement:AtREG352 \| OctamerElement:AtREG356 \| OctamerElement:AtREG353	REG	GCCCAATA \| GGCCCAAT \| AGGCCCAA \| AAGGCCCA	120.5 \| 121.5 \| 122.5 \| 123.5	TAIR9	0.2992	0.0204	-0.2718	-0.3565	-0.2231	-0.2893
Gene:AT1G01100	OctamerElement:AtREG533 \| OctamerElement:AtREG469 \| OctamerElement:AtREG421	REG	TTGGGCTC \| TTTGGGCT \| ATTTGGGC	164.5 \| 165.5 \| 166.5	TAIR9	0.2992	0.0204	-0.2718	-0.3565	-0.2231	-0.2893
Gene:AT1G01100	OctamerElement:AtREG632	REG	AAAGTCAA	182.5	TAIR9	0.2992	0.0204	-0.2718	-0.3565	-0.2231	-0.2893
Gene:AT1G01110	OctamerElement:AtREG599	REG	GGTGTCGT	164.5	TAIR9	-0.6224	-0.9970	-0.8983	-1.0094	-1.3214	-1.3470
Gene:AT1G01120	OctamerElement:AtREG620	REG	CCCATATA	168.5	TAIR9	-1.4182	-0.0045	-0.4117	0.0407	-0.2198	-0.2529
Gene:AT1G01130	OctamerElement:AtREG611 \| OctamerElement:AtREG417 \| OctamerElement:AtREG355	REG	CCAATAAG \| CCCAATAA \| GCCCAATA	83.5 \| 84.5 \| 85.5	TAIR9	-1.3233	-1.4153	-1.4321	-1.3238	-1.6278	-1.6570
Gene:AT1G01140	OctamerElement:AtREG395	REG	GCGCGTGA	52.5	TAIR9	-4.7744	-4.2910	-5.3232	-4.9521	-5.5207	-5.2449
Gene:AT1G01140	OctamerElement:AtREG523 \| OctamerElement:AtREG615	REG	GGACCCAC \| GGGACCCA	65.5 \| 66.5	TAIR9	-4.7744	-4.2910	-5.3232	-4.9521	-5.5207	-5.2449
Gene:AT1G01140	OctamerElement:AtREG448 \| OctamerElement:AtREG379 \| OctamerElement:AtREG413	REG	CGTGGCAT \| ACGTGGCA \| TACGTGGC	76.5 \| 77.5 \| 78.5	TAIR9	-4.7744	-4.2910	-5.3232	-4.9521	-5.5207	-5.2449
Gene:AT1G01160	OctamerElement:AtREG507 \| OctamerElement:AtREG504 \| OctamerElement:AtREG354 \| OctamerElement:AtREG353 \| OctamerElement:AtREG351 \| OctamerElement:AtREG577	REG	CCATGGGC \| CATGGGCC \| ATGGGCCT \| TGGGCCTT \| GGGCCTTA \| GGCCTTAG	215.5 \| 214.5 \| 213.5 \| 212.5 \| 211.5 \| 210.5	TAIR9	-0.5693	-0.4805	-0.5346	-0.8392	-0.5201	-0.5496
Gene:AT1G01160	OctamerElement:AtREG563 \| OctamerElement:AtREG360 \| OctamerElement:AtREG358 \| OctamerElement:AtREG356 \| OctamerElement:AtREG373 \| OctamerElement:AtREG421	REG	CTTAGGCC \| TTAGGCCC \| TAGGCCCA \| AGGCCCAA \| GGCCCAAA \| GCCCAAAT	196.5 \| 195.5 \| 194.5 \| 193.5 \| 192.5 \| 191.5	TAIR9	-0.5693	-0.4805	-0.5346	-0.8392	-0.5201	-0.5496
Gene:AT1G01160	OctamerElement:AtREG446 \| OctamerElement:AtREG484 \| OctamerElement:AtREG420 \| OctamerElement:AtREG373 \| OctamerElement:AtREG421	REG	ATTGGCCC \| TTGGCCCA \| TGGCCCAA \| GGCCCAAA \| GCCCAAAT	168.5 \| 167.5 \| 166.5 \| 165.5 \| 164.5	TAIR9	-0.5693	-0.4805	-0.5346	-0.8392	-0.5201	-0.5496
Gene:AT1G01170	OctamerElement:AtREG386	REG	GCCCATTT	63.5	TAIR9	-3.3330	-3.1952	-2.5724	-2.8534	-1.7000	-2.4322
Gene:AT1G01180	OctamerElement:AtREG470 \| OctamerElement:AtREG557 \| OctamerElement:AtREG632	REG	AGACACGT \| GACACGTA \| AAAGTCAA	164.5 \| 163.5 \| 156.5	TAIR9	-0.0817	-0.0974	-0.1137	-0.0502	-0.0254	-0.0869
Gene:AT1G01230	OctamerElement:AtREG424	REG	GGCCTATT	101.5	TAIR9	0.0431	0.2999	-0.0249	0.1287	-0.1690	-0.1338
Gene:AT1G01240	OctamerElement:AtREG590 \| OctamerElement:AtREG590	REG	AACACGTG \| CACGTGTT	133.5 \| 131.5	TAIR9	-1.3528	-1.6314	-1.4568	-1.5141	-1.1907	-1.2650
Gene:AT1G01240	OctamerElement:AtREG527 \| OctamerElement:AtREG569 \| OctamerElement:AtREG520	REG	GTGTCGTT \| TGTCGTTT \| GTCGTTTT	72.5 \| 71.5 \| 70.5	TAIR9	-1.3528	-1.6314	-1.4568	-1.5141	-1.1907	-1.2650
Gene:AT1G01260	OctamerElement:AtREG636	REG	TAAGGGGT	171.5	TAIR9	-0.4051	-0.4315	-0.2418	-0.3492	-0.0480	-0.1061
Gene:AT1G01260	OctamerElement:AtREG463 \| OctamerElement:AtREG455 \| OctamerElement:AtREG412 \| OctamerElement:AtREG473	REG	GACCCGGT \| ACCCGGTT \| CCGGTTTA \| CGGTTTAA	114.5 \| 113.5 \| 111.5 \| 110.5	TAIR9	-0.4051	-0.4315	-0.2418	-0.3492	-0.0480	-0.1061
Gene:AT1G01320	OctamerElement:AtREG411	REG	AGAGGCCC	144.5	TAIR9	-4.7895	-4.9926	-3.6014	-4.3005	-3.9554	-4.5249
Gene:AT1G01320	OctamerElement:AtREG396 \| OctamerElement:AtREG357 \| OctamerElement:AtREG361 \| OctamerElement:AtREG354 \| OctamerElement:AtREG358 \| OctamerElement:AtREG360 \| OctamerElement:AtREG563	REG	CCCATTAA \| GCCCATTA \| GGCCCATT \| AGGCCCAT \| TAGGCCCA \| TTAGGCCC \| CTTAGGCC	159.5 \| 160.5 \| 161.5 \| 162.5 \| 163.5 \| 164.5 \| 165.5	TAIR9	-4.7895	-4.9926	-3.6014	-4.3005	-3.9554	-4.5249
Gene:AT1G01370	OctamerElement:AtREG642	REG	AGGGGTAA	224.5	TAIR9	-0.9591	-1.4423	-1.9995	-1.9529	-2.3391	-2.2516
Gene:AT1G01430	OctamerElement:AtREG608	REG	AAGCCACG	199.5	TAIR9	-0.7070	-0.7292	-0.5868	-0.5579	-1.1214	-1.3421
Gene:AT1G01470	OctamerElement:AtREG638	REG	GACCGACT	65.5	TAIR9	-0.2239	-0.5741	-0.7036	-0.3701	-0.8168	-0.8253
Gene:AT1G01470	OctamerElement:AtREG588	REG	TCACACGT	108.5	TAIR9	-0.2239	-0.5741	-0.7036	-0.3701	-0.8168	-0.8253
Gene:AT1G01470	OctamerElement:AtREG557 \| OctamerElement:AtREG470	REG	GACACGTA \| AGACACGT	151.5 \| 152.5	TAIR9	-0.2239	-0.5741	-0.7036	-0.3701	-0.8168	-0.8253
Gene:AT1G01480	OctamerElement:AtREG591	REG	CCCATGGG	74.5	TAIR9	-2.2337	-2.2136	-2.4851	-2.4215	-3.0016	-2.6856
Gene:AT1G01490	OctamerElement:AtREG395	REG	TCACGCGC	209.5	TAIR9	-1.2893	-0.2034	-0.1334	0.1434	0.0404	-0.0476
Gene:AT1G01490	OctamerElement:AtREG486	REG	CACGCGCC	222.5	TAIR9	-1.2893	-0.2034	-0.1334	0.1434	0.0404	-0.0476
Gene:AT1G01500	OctamerElement:AtREG426 \| OctamerElement:AtREG378 \| OctamerElement:AtREG372 \| OctamerElement:AtREG386 \| OctamerElement:AtREG443 \| OctamerElement:AtREG610	REG	TAAGCCCA \| AAGCCCAT \| AGCCCATT \| GCCCATTT \| CCCATTTA \| TTTAACGG	221.5 \| 220.5 \| 219.5 \| 218.5 \| 217.5 \| 213.5	TAIR9	-2.2413	-1.7036	-1.7406	-1.8942	-1.6738	-1.8274
Gene:AT1G01500	OctamerElement:AtREG437 \| OctamerElement:AtREG458 \| OctamerElement:AtREG384	REG	ATGGCCCA \| TGGCCCAG \| GGCCCAGT	191.5 \| 190.5 \| 189.5	TAIR9	-2.2413	-1.7036	-1.7406	-1.8942	-1.6738	-1.8274
Gene:AT1G01500	OctamerElement:AtREG589	REG	AAAAAGCC	156.5	TAIR9	-2.2413	-1.7036	-1.7406	-1.8942	-1.6738	-1.8274
Gene:AT1G01500	OctamerElement:AtREG588 \| OctamerElement:AtREG460 \| OctamerElement:AtREG541	REG	TCACACGT \| CACACGTG \| CACGTGCG	137.5 \| 136.5 \| 134.5	TAIR9	-2.2413	-1.7036	-1.7406	-1.8942	-1.6738	-1.8274
Gene:AT1G01500	OctamerElement:AtREG567 \| OctamerElement:AtREG602	REG	AGGGTATT \| GGGTATTT	110.5 \| 109.5	TAIR9	-2.2413	-1.7036	-1.7406	-1.8942	-1.6738	-1.8274
Gene:AT1G01500	OctamerElement:AtREG592	REG	TTTGACCC	80.5	TAIR9	-2.2413	-1.7036	-1.7406	-1.8942	-1.6738	-1.8274
Gene:AT1G01500	OctamerElement:AtREG646	REG	CGTAATTA	69.5	TAIR9	-2.2413	-1.7036	-1.7406	-1.8942	-1.6738	-1.8274
Gene:AT1G01510	OctamerElement:AtREG540 \| OctamerElement:AtREG537 \| OctamerElement:AtREG439 \| OctamerElement:AtREG415 \| OctamerElement:AtREG565	REG	ACGGCGTC \| GGCGTCGT \| GCGTCGTT \| CGTCGTTT \| GTCGTTTA	208.5 \| 206.5 \| 205.5 \| 204.5 \| 203.5	TAIR9	0.2121	-0.2560	-0.0011	-0.1939	-0.1639	-0.2905
Gene:AT1G01510	OctamerElement:AtREG578	REG	GATGACGT	179.5	TAIR9	0.2121	-0.2560	-0.0011	-0.1939	-0.1639	-0.2905
Gene:AT1G01510	OctamerElement:AtREG529 \| OctamerElement:AtREG373 \| OctamerElement:AtREG392 \| OctamerElement:AtREG400	REG	TTTTGGGC \| TTTGGGCC \| TTGGGCCC \| TGGGCCCT	112.5 \| 111.5 \| 110.5 \| 109.5	TAIR9	0.2121	-0.2560	-0.0011	-0.1939	-0.1639	-0.2905
Gene:AT1G01540	OctamerElement:AtREG630	REG	CGACATCG	155.5	TAIR9	-0.7856	-1.0445	-1.0115	-0.9819	-1.0171	-1.0667
Gene:AT1G01550	OctamerElement:AtREG632	REG	TTGACTTT	194.5	TAIR9	0.2555	-0.0185	0.1052	-0.2311	0.6112	0.5095
Gene:AT1G01560	OctamerElement:AtREG507	REG	CCATGGGC	203.5	TAIR9	-2.5861	-2.1794	-3.3897	-2.9851	-2.7386	-2.7721
Gene:AT1G01620	OctamerElement:AtREG553 \| OctamerElement:AtREG554	REG	CAACGGTC \| TCCAACGG	444.5 \| 446.5	TAIR9	0.8586	0.1952	0.6311	0.2310	0.4745	-0.0176
Gene:AT1G01620	OctamerElement:AtREG475	REG	CTAGGCCC	525.5	TAIR9	0.8586	0.1952	0.6311	0.2310	0.4745	-0.0176
Gene:AT1G01630	OctamerElement:AtREG440 \| OctamerElement:AtREG419 \| OctamerElement:AtREG485	REG	CTGACGTG \| TGACGTGG \| TGGGCTCA	208.5 \| 207.5 \| 202.5	TAIR9	-1.2345	-0.7083	-0.9354	-0.7581	-1.1669	-1.0947
Gene:AT1G01630	OctamerElement:AtREG531	REG	AAAACGGC	187.5	TAIR9	-1.2345	-0.7083	-0.9354	-0.7581	-1.1669	-1.0947
Gene:AT1G01630	OctamerElement:AtREG533 \| OctamerElement:AtREG402 \| OctamerElement:AtREG355 \| OctamerElement:AtREG624	REG	GAGCCCAA \| AGCCCAAT \| GCCCAATA \| CCCAATAG	104.5 \| 103.5 \| 102.5 \| 101.5	TAIR9	-1.2345	-0.7083	-0.9354	-0.7581	-1.1669	-1.0947
Gene:AT1G01630	OctamerElement:AtREG425 \| OctamerElement:AtREG351 \| OctamerElement:AtREG353 \| OctamerElement:AtREG356 \| OctamerElement:AtREG352 \| OctamerElement:AtREG355	REG	ATAAGGCC \| TAAGGCCC \| AAGGCCCA \| AGGCCCAA \| GGCCCAAT \| GCCCAATA	87.5 \| 86.5 \| 85.5 \| 84.5 \| 83.5 \| 82.5	TAIR9	-1.2345	-0.7083	-0.9354	-0.7581	-1.1669	-1.0947
Gene:AT1G01650	OctamerElement:AtREG564 \| OctamerElement:AtREG626	REG	GCGTTTTA \| CAGCGTTT	1082.5 \| 1084.5	TAIR9	-0.2560	-0.8007	-0.6689	-0.7864	-0.5578	-0.7403
Gene:AT1G01650	OctamerElement:AtREG632	REG	AAAGTCAA	1095.5	TAIR9	-0.2560	-0.8007	-0.6689	-0.7864	-0.5578	-0.7403
Gene:AT1G01650	OctamerElement:AtREG486	REG	CACGCGCC	1129.5	TAIR9	-0.2560	-0.8007	-0.6689	-0.7864	-0.5578	-0.7403
Gene:AT1G01650	OctamerElement:AtREG536	REG	ACACGCGT	1139.5	TAIR9	-0.2560	-0.8007	-0.6689	-0.7864	-0.5578	-0.7403
Gene:AT1G01650	OctamerElement:AtREG449 \| OctamerElement:AtREG420 \| OctamerElement:AtREG484	REG	GGCCCAAC \| TGGCCCAA \| TTGGCCCA	182.5 \| 183.5 \| 184.5	TAIR9	-0.2560	-0.8007	-0.6689	-0.7864	-0.5578	-0.7403
Gene:AT1G01670	OctamerElement:AtREG428 \| OctamerElement:AtREG478 \| OctamerElement:AtREG481 \| OctamerElement:AtREG517 \| OctamerElement:AtREG466 \| OctamerElement:AtREG489	REG	CGTGTCGT \| ACGTGTCG \| GACGTGTC \| TGACGTGT \| GTGACGTG \| CGTGACGT	62.5 \| 63.5 \| 64.5 \| 65.5 \| 66.5 \| 67.5	TAIR9	0.1170	-0.0454	-0.1879	-0.1450	0.1516	0.1640
Gene:AT1G01690	OctamerElement:AtREG417	REG	TTATTGGG	188.5	TAIR9	-0.5538	-0.4270	-0.5349	-0.5029	-0.4424	-0.3153
Gene:AT1G01690	OctamerElement:AtREG364 \| OctamerElement:AtREG490 \| OctamerElement:AtREG437	REG	TATGGGCC \| ATGGGCCA \| TGGGCCAT	169.5 \| 168.5 \| 167.5	TAIR9	-0.5538	-0.4270	-0.5349	-0.5029	-0.4424	-0.3153
Gene:AT1G01690	OctamerElement:AtREG558 \| OctamerElement:AtREG357 \| OctamerElement:AtREG372 \| OctamerElement:AtREG378 \| OctamerElement:AtREG376 \| OctamerElement:AtREG365 \| OctamerElement:AtREG601 \| OctamerElement:AtREG394 \| OctamerElement:AtREG364 \| OctamerElement:AtREG354 \| OctamerElement:AtREG447 \| OctamerElement:AtREG411	REG	CTAATGGG \| TAATGGGC \| AATGGGCT \| ATGGGCTT \| TGGGCTTT \| GGGCTTTA \| GGCTTTAT \| TTATGGGC \| TATGGGCC \| ATGGGCCT \| TGGGCCTC \| GGGCCTCT	149.5 \| 148.5 \| 147.5 \| 146.5 \| 145.5 \| 144.5 \| 143.5 \| 139.5 \| 138.5 \| 137.5 \| 136.5 \| 135.5	TAIR9	-0.5538	-0.4270	-0.5349	-0.5029	-0.4424	-0.3153
Gene:AT1G01710	OctamerElement:AtREG504 \| OctamerElement:AtREG490 \| OctamerElement:AtREG437	REG	CATGGGCC \| ATGGGCCA \| TGGGCCAT	277.5 \| 276.5 \| 275.5	TAIR9	-0.6879	-0.6964	-0.5749	-0.4090	-0.3264	-0.2969
Gene:AT1G01710	OctamerElement:AtREG416 \| OctamerElement:AtREG416 \| OctamerElement:AtREG545	REG	TTAAGGCC \| GGCCTTAA \| TTAAAGCC	239.5 \| 235.5 \| 231.5	TAIR9	-0.6879	-0.6964	-0.5749	-0.4090	-0.3264	-0.2969
Gene:AT1G01710	OctamerElement:AtREG396 \| OctamerElement:AtREG357 \| OctamerElement:AtREG361 \| OctamerElement:AtREG354 \| OctamerElement:AtREG353 \| OctamerElement:AtREG398	REG	TTAATGGG \| TAATGGGC \| AATGGGCC \| ATGGGCCT \| TGGGCCTT \| GGGCCTTG	222.5 \| 221.5 \| 220.5 \| 219.5 \| 218.5 \| 217.5	TAIR9	-0.6879	-0.6964	-0.5749	-0.4090	-0.3264	-0.2969
Gene:AT1G01710	OctamerElement:AtREG590 \| OctamerElement:AtREG628	REG	AACACGTG \| ACACGTGA	93.5 \| 92.5	TAIR9	-0.6879	-0.6964	-0.5749	-0.4090	-0.3264	-0.2969
Gene:AT1G01710	OctamerElement:AtREG575	REG	CGAACCGA	71.5	TAIR9	-0.6879	-0.6964	-0.5749	-0.4090	-0.3264	-0.2969
Gene:AT1G01710	OctamerElement:AtREG513	REG	GTCCACGT	63.5	TAIR9	-0.6879	-0.6964	-0.5749	-0.4090	-0.3264	-0.2969
Gene:AT1G01710	OctamerElement:AtREG598 \| OctamerElement:AtREG412 \| OctamerElement:AtREG521	REG	ATAAACCG \| TAAACCGG \| AAACCGGA	47.5 \| 46.5 \| 45.5	TAIR9	-0.6879	-0.6964	-0.5749	-0.4090	-0.3264	-0.2969
Gene:AT1G01720	OctamerElement:AtREG644	REG	ACCGGAAA	280.5	TAIR9	-0.7521	-1.6704	-1.3198	-1.7242	-1.2264	-0.7638
Gene:AT1G01720	OctamerElement:AtREG451	REG	GGTTCGGT	242.5	TAIR9	-0.7521	-1.6704	-1.3198	-1.7242	-1.2264	-0.7638
Gene:AT1G01720	OctamerElement:AtREG576 \| OctamerElement:AtREG569	REG	GAAACGAC \| AAACGACA	183.5 \| 182.5	TAIR9	-0.7521	-1.6704	-1.3198	-1.7242	-1.2264	-0.7638
Gene:AT1G01720	OctamerElement:AtREG471 \| OctamerElement:AtREG371 \| OctamerElement:AtREG388 \| OctamerElement:AtREG419 \| OctamerElement:AtREG440 \| OctamerElement:AtREG515	REG	TCGCCACG \| CGCCACGT \| GCCACGTC \| CCACGTCA \| CACGTCAG \| ACGTCAGC	146.5 \| 145.5 \| 144.5 \| 143.5 \| 142.5 \| 141.5	TAIR9	-0.7521	-1.6704	-1.3198	-1.7242	-1.2264	-0.7638
Gene:AT1G01720	OctamerElement:AtREG472	REG	ACGTGTCC	113.5	TAIR9	-0.7521	-1.6704	-1.3198	-1.7242	-1.2264	-0.7638
Gene:AT1G01720	OctamerElement:AtREG464 \| OctamerElement:AtREG382 \| OctamerElement:AtREG460	REG	CCCACGTG \| CCACGTGT \| CACGTGTG	90.5 \| 89.5 \| 88.5	TAIR9	-0.7521	-1.6704	-1.3198	-1.7242	-1.2264	-0.7638
Gene:AT1G01720	OctamerElement:AtREG478 \| OctamerElement:AtREG366 \| OctamerElement:AtREG366 \| OctamerElement:AtREG472	REG	CGACACGT \| GACACGTG \| CACGTGTC \| ACGTGTCC	50.5 \| 49.5 \| 47.5 \| 46.5	TAIR9	-0.7521	-1.6704	-1.3198	-1.7242	-1.2264	-0.7638
Gene:AT1G01730	OctamerElement:AtREG520 \| OctamerElement:AtREG569 \| OctamerElement:AtREG527	REG	GTCGTTTT \| AAACGACA \| AACGACAC	169.5 \| 168.5 \| 167.5	TAIR9	-0.1510	-0.2836	-0.2205	-0.3931	0.1295	0.0382

* Row count is limited to 100.

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Linkdata Work Information

Developmental Genomic (AtGenExpress + PPDB promoter motif) normalized