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DIURNAL gene expression + PLACE promoter motif

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Circadian Data collected over two days (44 hours) at four hour intervals in various growth conditions. We calculated the Phase of each data by non-linear best fit to a sine wave with a 24 hour period, and similarly calculated the Amplitude. Visually checking the 1000 largest amplitude genes showed a good fit in all cases, though a few genes clearly deviated from sinusoidal behavior. All had a major period of 24 hours. For each gene locus, we added the various sizes of motifs predicted by PLACE (Plant Cis-acting Regulatory DNA Elements) database. Gene Loci without expression data or motif data were removed from this database.

References (for PLACE):
http://www.ncbi.nlm.nih.gov/pubmed/9847208
References (for DIURNAL)
http://www.ncbi.nlm.nih.gov/pubmed/18419293


Descriptions for each data table:
DiurnalHours_PLACE_COL_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_COL_SD
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_DD_DDHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Dark (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Dark (24h).
DiurnalHours_PLACE_LDHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LDHH_SM
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Smith method.
DiurnalHours_PLACE_LDHH_ST
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h), by using the Stitt method.
DiurnalHours_PLACE_LER_SD
This collection of Gene Expression Properties are associated with the Arabidopsis Ler (Landsberg-ereta) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_LIGHT5_HIF138_13
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-13 (HETEROGENOUS INBRED FAMILY 138-13) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_HIF138_8
This collection of Gene Expression Properties are associated with the Arabidopsis hif138-8 (HETEROGENOUS INBRED FAMILY 138-8) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LIGHT5_znknOX
This collection of Gene Expression Properties are associated with the Arabidopsis tsp-ox (hif138-8) (TANDEM ZINCKNUCKLE PROTEIN-ox) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_LL12_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Kay method.
DiurnalHours_PLACE_LL23_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (24h), and subjected to Light (24h) by the Miller method.
DiurnalHours_PLACE_LLHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h).
DiurnalHours_PLACE_LL_LDHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Dark (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_LL_LLHC
This collection of Gene Expression Properties are associated with the Arabidopsis Columbia strain 0, grown under the circadian condition Light (12h) Light (12h) / Hot (12h) / Cold (12h), and subjected to Light (24h).
DiurnalHours_PLACE_lhyox_SD
This collection of Gene Expression Properties are associated with the Arabidopsis lhy (lhy-ox) (LATE ELONGATED HYPOCOTYL) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_longday
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of long day light, that is, Light (16h) Dark (8h) by using the Kay method.
DiurnalHours_PLACE_lux_2_LDHH
This collection of Gene Expression Properties are associated with the Arabidopsis lux-2 (LUX ARRHYTHMO-2) strain, grown under the circadian condition Light (12h) Dark (12h) / Hot (24h).
DiurnalHours_PLACE_phyB9_SD
This collection of Gene Expression Properties are associated with the Arabidopsis phyB9 (PHYTOCHROME B-9) strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h).
DiurnalHours_PLACE_shortday
This collection of Gene Expression Properties are associated with the Arabidopsis Ler strain, grown under the circadian condition of short day light, that is, Light (8h) Dark (16h) by using the Kay method.
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://www.dna.affrc.go.jp/PLACE/
#license http://creativecommons.org/publicdomain/zero/1.0/deed.ja
#file_name DiurnalHours_PLACE_longday
#download_from http://linkdata.org/work/rdf1s746i
#namespace ATTED http://atted.jp/data/locus/
#namespace PLACE http://www.dna.affrc.go.jp/sigscan/disp.cgi?
#namespace PPDB http://ppdb.agr.gifu-u.ac.jp/ppdb/cgi-bin/display.cgi?organism=At&gene=
#namespace TAIR http://arabidopsis.org/servlets/TairObject?type=locus&name=
#property motif motif name motif sequence motif position Origin of baseline sequence Probe Condition Phase Correlation label:longday_0_hours label:longday_4_hours label:longday_8_hours label:longday_12_hours label:longday_16_hours label:longday_20_hours label:longday_24_hours label:longday_28_hours label:longday_32_hours label:longday_36_hours label:longday_40_hours label:longday_44_hours Sine Phase Sine Amplitude
#object_type_xsd string string string string string string string string string string string string string string string string string string string string string string string
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion Assertion
TAIR:ATMG00640 PLACE:S000483 SORLIP2AT GGGCC 79 PPDB 244901_at longday 22 0.720735 7.159620 5.258570 4.605620 4.966930 5.629740 6.310340 5.207820 5.418130 5.813640 5.290860 4.930300 7.067750 20.267525 0.366685
TAIR:ATMG00650 PLACE:S000394 | PLACE:S000414 | PLACE:S000483 | PLACE:S000153 ACGTABREMOTIFA2OSEM | ABRELATERD1 | SORLIP2AT | LTRECOREATCOR15 ACGTGTC | ACGTG | GGGCC | CCGAC 77 | 78 | 101 | 159 TAIR9 244902_at longday 20 0.708028 5.638170 4.835520 5.123360 4.620230 5.093300 5.002120 5.229370 4.352270 4.782960 5.016610 6.286280 5.894370 23.141633 0.235561
TAIR:ATMG00660 PLACE:S000483 | PLACE:S000474 | PLACE:S000474 | PLACE:S000167 | PLACE:S000507 SORLIP2AT | SITEIIATCYTC | SITEIIATCYTC | MYBPLANT | ABRERATCAL GGGCC | TGGGCC | TGGGCT | AACCAACC | AACGCGG 212 | 212.5 | 217.5 | 303.5 | 531 TAIR9 244903_at longday 23 0.725492 12.826900 5.494500 8.093840 6.889010 7.865160 9.737750 10.212700 6.165840 10.083900 7.604950 9.696390 9.106660 20.920956 0.684645
TAIR:ATMG00670 PLACE:S000477 | PLACE:S000111 | PLACE:S000111 | PLACE:S000477 ANAERO1CONSENSUS | TATABOX4 | TATABOX4 | ANAERO1CONSENSUS AAACAAA | TATATAA | TATATAA | AAACAAA 98 | 155 | 212 | 398 TAIR9 244904_at longday 0 0.737022 6.453530 4.681530 5.273230 5.282230 4.593100 5.065190 5.796920 5.489580 5.114060 5.409970 4.316220 5.325570 19.763041 0.203911
TAIR:ATMG00680 PLACE:S000153 LTRECOREATCOR15 CCGAC 478 TAIR9 244905_at longday 2 0.559893 5.204970 4.640230 4.939590 4.804920 5.213970 4.252340 4.921320 5.418230 4.451910 4.351620 4.385070 4.374280 21.492206 0.111545
TAIR:ATMG00690 PLACE:S000080 | PLACE:S000200 POLASIG1 | HBOXCONSENSUSPVCHS AATAAA | CCTACCTTAGAATCT 343.5 | 540 TAIR9 244906_at longday 22 0.486180 4.829330 3.986150 4.214870 4.619390 4.249350 5.223240 5.250320 4.679170 5.600010 5.022900 4.664150 5.114210 21.285273 0.073393
TAIR:ATMG00710 - - - - TAIR9 244907_at longday 11 0.577419 3.554850 4.641820 6.142160 5.393830 5.219290 4.742480 4.917230 5.617650 4.412090 4.816200 5.367770 4.594610 4.862623 0.218823
TAIR:ATMG00720 - - - - TAIR9 244908_at longday 1 0.533012 5.925570 5.071410 4.617580 4.699270 4.775600 4.079570 4.489400 4.729100 4.266760 4.337320 4.681590 5.042710 17.791345 0.139292
TAIR:ATMG00740 PLACE:S000477 | PLACE:S000507 | PLACE:S000477 ANAERO1CONSENSUS | ABRERATCAL | ANAERO1CONSENSUS AAACAAA | AACGTGG | AAACAAA 72 | 103 | 126 TAIR9 244909_at longday 16 0.568433 4.355150 3.580130 3.632940 3.767780 3.482430 3.775100 3.756170 3.266390 4.048860 4.007490 3.848500 4.362370 13.437330 0.072948
TAIR:ATMG00750 PLACE:S000507 | PLACE:S000474 ABRERATCAL | SITEIIATCYTC CACGCGG | TGGGCT 332 | 361.5 TAIR9 244910_s_at longday 16 0.563302 4.309970 3.900750 4.844990 3.627780 5.107380 3.664420 4.247000 4.604490 4.500910 4.246100 4.630950 4.268840 6.910710 0.054867
TAIR:AT2G07783 PLACE:S000149 CCA1ATLHCB1 AACAATCT 317.5 TAIR9 244912_at longday 1 0.690166 364.644000 212.752000 140.755000 62.444500 42.458600 184.831000 146.033000 73.194300 275.416000 136.000000 41.146300 87.734600 20.750146 37.864001
TAIR:ATMG00840 PLACE:S000426 UPRMOTIFIIAT CCCAGAGTAGCCAACCACG 107 TAIR9 244913_at longday 23 0.719991 4.451010 3.742560 3.607210 4.191590 3.723930 5.276000 4.837830 4.334470 4.350050 4.221160 3.508940 3.942460 17.292936 0.163524
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244914_at longday 13 0.606836 4.575000 5.926680 5.760010 6.676220 6.048760 6.331110 6.258560 5.279860 6.819570 6.120300 8.117680 5.227000 7.533748 0.357940
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244915_s_at longday 13 0.687807 3.377620 3.687060 4.233110 4.168730 4.744910 3.906640 4.192020 3.289330 3.982280 4.220930 3.891610 3.410180 7.162696 0.183378
TAIR:ATMG00880 PLACE:S000474 SITEIIATCYTC TGGGCT 409.5 TAIR9 244916_at longday 8 0.677983 2.009900 2.933340 2.777570 2.800340 2.337370 2.145680 2.705430 2.478770 2.843380 2.855000 2.361700 2.744230 2.479507 0.130827
TAIR:AT2G07682 PLACE:S000153 | PLACE:S000167 LTRECOREATCOR15 | MYBPLANT CCGAC | CACCAAAC 124 | 492.5 TAIR9 244917_at longday 3 0.815377 3.317060 3.636390 2.927650 3.234200 3.301150 2.771490 3.439930 4.246060 2.969000 3.314400 2.885030 3.389230 21.081389 0.143156
TAIR:ATMG00960 PLACE:S000507 ABRERATCAL AACGCGG 301 TAIR9 244919_at longday 10 0.838665 3.150820 3.099350 4.055200 3.570760 3.245900 3.404510 2.776470 2.813640 4.003150 4.157390 3.456040 3.396890 5.455477 0.237729
TAIR:ATMG00990 PLACE:S000483 | PLACE:S000483 | PLACE:S000071 | PLACE:S000483 | PLACE:S000474 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SORLIP2AT | NONAMERMOTIFTAH3H4 | SORLIP2AT | SITEIIATCYTC | SORLIP2AT | SITEIIATCYTC GGGCC | GGGCC | CATCCAACG | GGGCC | TGGGCC | GGGCC | TGGGCC 93 | 176 | 230 | 402 | 402.5 | 450 | 450.5 TAIR9 244920_s_at longday 1 0.521324 47.066900 42.760800 29.169700 28.716100 28.746500 44.696800 37.832900 34.180600 56.555600 46.084600 34.054500 39.187800 20.694846 1.778684
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244921_s_at longday 0 0.570392 36.683500 31.427300 34.944700 25.093500 26.683300 50.953900 38.432000 56.818200 54.783900 47.856600 32.162600 31.711000 22.473927 2.856471
TAIR:AT2G07674 PLACE:S000456 | PLACE:S000477 | PLACE:S000111 VOZATVPP | ANAERO1CONSENSUS | TATABOX4 GCGTTCCTCGGACGC | AAACAAA | TATATAA 173 | 314 | 378 TAIR9 244922_s_at longday 18 0.802314 6.043380 4.703840 5.231270 5.749800 5.432770 5.775880 6.321190 4.576420 4.807320 6.101240 5.151160 5.527840 12.835081 0.189908
TAIR:ATMG01020 PLACE:S000477 | PLACE:S000111 ANAERO1CONSENSUS | TATABOX4 AAACAAA | TATATAA 95 | 159 TAIR9 244923_s_at longday 0 0.539547 5.929430 7.364290 5.793210 5.914310 5.560700 7.462170 6.730140 6.657930 6.329640 6.334950 5.884560 5.440790 20.445656 0.217063
TAIR:ATMG01040 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 376 TAIR9 244924_at longday 4 0.547752 6.609060 5.348670 5.641170 5.064390 5.416350 4.959970 4.889380 6.018240 5.873230 5.667740 6.001890 5.251550 23.686337 0.090628
TAIR:ATMG00510 PLACE:S000477 | PLACE:S000111 | PLACE:S000081 | PLACE:S000186 ANAERO1CONSENSUS | TATABOX4 | POLASIG2 | SURE1STPAT21 AAACAAA | TATATAA | AATTAAA | AATAGAAAA 151 | 293 | 408 | 414 TAIR9 244925_at longday 4 0.693414 10.753800 16.576300 11.276700 12.568100 13.233700 14.109000 12.164600 15.566600 13.766500 14.171500 12.501100 15.113300 14.488984 0.202318
TAIR:ATMG00520 PLACE:S000153 | PLACE:S000426 | PLACE:S000080 LTRECOREATCOR15 | UPRMOTIFIIAT | POLASIG1 CCGAC | CCTTTCACCTCTTCCCACG | AATAAA 179 | 357 | 516.5 TAIR9 244926_s_at longday 8 0.626045 4.023740 3.874620 4.180200 3.567260 4.882300 4.052060 3.762120 3.438330 6.155650 4.219910 4.123390 4.231520 5.371044 0.158292
TAIR:ATMG00530 PLACE:S000483 | PLACE:S000474 | PLACE:S000414 SORLIP2AT | SITEIIATCYTC | ABRELATERD1 GGGCC | TGGGCC | ACGTG 172 | 172.5 | 458 TAIR9 244927_at longday 4 0.633736 5.770430 7.313480 6.484690 6.082460 6.038220 6.568640 5.503920 6.726600 5.577560 6.707600 6.400680 6.464380 1.521417 0.049360
TAIR:ATMG00570 PLACE:S000111 | PLACE:S000153 TATABOX4 | LTRECOREATCOR15 TATATAA | CCGAC 184 | 549 TAIR9 244928_s_at longday 1 0.575673 10.404400 6.862960 6.316810 5.395480 4.877320 6.369960 6.105640 4.623470 7.366950 7.380260 4.331310 5.321710 20.909593 0.446486
TAIR:AT2G07717 PLACE:S000167 | PLACE:S000192 | PLACE:S000080 | PLACE:S000109 MYBPLANT | ACIPVPAL2 | POLASIG1 | TATABOX2 CACCTACC | CCCACCTACC | AATAAA | TATAAAT 33.5 | 34.5 | 125.5 | 129 TAIR9 244929_at longday 0 0.559824 114.710000 75.702800 72.031500 68.948700 89.878000 67.133900 82.523300 77.057500 97.832000 83.710900 85.098900 68.401400 20.183931 1.615357
TAIR:AT2G07809 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 17 | 207.5 TAIR9 244930_at longday 14 0.459196 3.188580 3.240820 2.843160 3.704440 2.964250 3.721820 2.842810 3.470450 3.433450 3.308470 3.010760 2.649840 8.964021 0.066068
TAIR:ATMG00630 PLACE:S000483 | PLACE:S000483 SORLIP2AT | SORLIP2AT GGGCC | GGGCC 387 | 428 TAIR9 244931_at longday 21 0.644404 4.651440 5.741560 4.834510 5.658750 6.011700 5.817820 6.174220 6.097850 4.381040 4.894180 5.695170 4.978350 14.800230 0.140635
TAIR:ATCG01060 PLACE:S000149 CCA1ATLHCB1 AAAAATCT 80.5 TAIR9 244932_at longday 3 0.743069 902.415000 697.122000 786.694000 681.497000 423.044000 931.466000 1025.220000 796.500000 1286.060000 855.028000 534.331000 1133.550000 15.619317 67.259984
TAIR:ATCG01070 PLACE:S000483 | PLACE:S000477 | PLACE:S000185 SORLIP2AT | ANAERO1CONSENSUS | SURE2STPAT21 GGGCC | AAACAAA | AATACTAAT 90 | 361 | 433 PPDB 244933_at longday 22 0.705841 711.053000 645.510000 516.839000 509.025000 412.943000 596.027000 691.939000 403.352000 622.075000 453.051000 549.414000 674.969000 17.726450 45.968622
TAIR:ATCG01080 PLACE:S000185 | PLACE:S000111 | PLACE:S000081 | PLACE:S000111 | PLACE:S000477 SURE2STPAT21 | TATABOX4 | POLASIG2 | TATABOX4 | ANAERO1CONSENSUS AATACTAAT | TATATAA | AATTAAA | TATATAA | AAACAAA 52 | 176 | 198 | 212 | 278 TAIR9 244934_at longday 20 0.511907 178.481000 162.828000 149.363000 178.538000 149.384000 172.602000 151.978000 131.131000 151.684000 126.710000 197.354000 165.231000 23.165792 6.621071
TAIR:ATCG01090 PLACE:S000153 LTRECOREATCOR15 CCGAC 288 PPDB 244935_at longday 20 0.750871 6859.240000 5479.680000 5074.980000 6079.100000 7613.340000 6408.420000 7315.560000 7141.900000 6236.250000 5910.770000 7595.460000 8113.080000 13.762515 467.264909
TAIR:ATCG01100 PLACE:S000080 POLASIG1 AATAAA 452.5 TAIR9 244936_at longday 22 0.711408 2537.950000 2150.920000 1863.600000 2282.880000 2717.150000 2549.920000 2867.940000 3069.060000 2671.080000 2058.570000 2398.300000 3207.320000 16.049118 165.063655
TAIR:ATCG01110 PLACE:S000081 | PLACE:S000053 | PLACE:S000081 | PLACE:S000080 | PLACE:S000081 POLASIG2 | HEXMOTIFTAH3H4 | POLASIG2 | POLASIG1 | POLASIG2 AATTAAA | ACGTCA | AATTAAA | AATAAA | AATTAAA 30 | 110.5 | 381 | 456.5 | 522 TAIR9 244937_at longday 23 0.758776 327.425000 171.491000 120.226000 168.754000 212.359000 190.124000 427.628000 328.533000 259.160000 140.100000 184.913000 390.225000 17.460393 50.339516
TAIR:ATCG01120 PLACE:S000081 | PLACE:S000080 | PLACE:S000081 | PLACE:S000111 | PLACE:S000471 POLASIG2 | POLASIG1 | POLASIG2 | TATABOX4 | UP1ATMSD AATTAAA | AATAAA | AATTAAA | TATATAA | GGCCCAATT 11 | 86.5 | 152 | 212 | 349 TAIR9 244938_at longday 1 0.790871 205.236000 113.660000 85.196700 87.783500 56.086000 82.169500 123.907000 107.827000 106.820000 107.981000 68.831800 104.039000 19.758709 16.628212
TAIR:ATCG00065 PLACE:S000080 | PLACE:S000080 | PLACE:S000186 | PLACE:S000111 POLASIG1 | POLASIG1 | SURE1STPAT21 | TATABOX4 AATAAA | AATAAA | AATAGAAAA | TATATAA 5.5 | 100.5 | 351 | 546 TAIR9 244939_at longday 1 0.811877 508.593000 251.675000 138.460000 219.960000 95.578300 200.776000 341.019000 297.851000 456.224000 298.660000 127.612000 117.963000 21.711422 52.633821
TAIR:ATCG01230 PLACE:S000414 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 ABRELATERD1 | POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 ACGTG | AATAAA | AATAAA | AATAAA | AATAAA 90 | 331.5 | 351.5 | 373.5 | 473.5 TAIR9 244940_at longday 0 0.817549 3086.720000 1894.840000 1167.310000 1548.540000 937.370000 2099.710000 2758.590000 2071.690000 2948.500000 2021.470000 1172.100000 1247.730000 20.592121 301.846861
TAIR:ATMG00010 PLACE:S000080 | PLACE:S000153 POLASIG1 | LTRECOREATCOR15 AATAAA | CCGAC 53.5 | 450 TAIR9 244941_at longday 0 0.688510 5.988140 5.808370 5.795680 4.667910 6.220260 6.272090 5.436310 5.207110 5.855890 5.236420 6.372830 5.504400 22.113587 0.139544
TAIR:ATMG00050 PLACE:S000483 | PLACE:S000474 | PLACE:S000081 | PLACE:S000080 | PLACE:S000483 | PLACE:S000474 SORLIP2AT | SITEIIATCYTC | POLASIG2 | POLASIG1 | SORLIP2AT | SITEIIATCYTC GGGCC | TGGGCC | AATTAAA | AATAAA | GGGCC | TGGGCT 248 | 248.5 | 287 | 411.5 | 435 | 478.5 TAIR9 244942_at longday 7 0.484897 3.127620 2.961820 3.534990 3.567140 2.848360 3.576160 3.318820 3.402360 2.993440 2.712390 3.042200 3.141370 16.245797 0.046322
TAIR:ATMG00070 PLACE:S000483 SORLIP2AT GGGCC 212 PPDB 244943_at longday 17 0.790636 10.818700 5.944110 6.297270 7.956090 8.477640 9.241070 8.964410 4.637010 9.912840 8.066320 9.759610 9.433910 12.504767 0.736845
TAIR:ATMG00110 PLACE:S000111 | PLACE:S000220 | PLACE:S000483 | PLACE:S000153 | PLACE:S000081 TATABOX4 | GRAZMRAB28 | SORLIP2AT | LTRECOREATCOR15 | POLASIG2 TATATAA | CATGCCGCC | GGGCC | CCGAC | AATTAAA 55 | 129 | 217 | 340 | 482 TAIR9 244945_at longday 20 0.579075 6.092420 6.592350 5.562140 6.104660 6.037800 6.566240 6.339920 5.453890 5.857510 5.987620 5.993510 5.738720 15.090058 0.091003
TAIR:ATMG00130 PLACE:S000080 POLASIG1 AATAAA 133.5 TAIR9 244947_at longday 20 0.409739 4.467390 3.567540 4.505320 4.691940 4.119290 4.478380 4.341530 3.974870 4.074290 3.209080 4.076440 4.057790 15.110058 0.064119
TAIR:ATMG00140 PLACE:S000153 | PLACE:S000080 LTRECOREATCOR15 | POLASIG1 CCGAC | AATAAA 134 | 542.5 TAIR9 244948_at longday 22 0.670636 5.167150 5.911610 3.911830 4.530640 5.270890 5.463290 5.037920 4.741010 4.567270 4.390340 4.628170 4.514630 17.000619 0.207933
TAIR:ATMG00150 - - - - TAIR9 244949_at longday 10 0.751899 3.409880 3.283270 4.953800 4.652720 3.820490 3.326970 3.500610 3.763900 3.730030 3.985700 3.659240 3.628900 4.548246 0.251999
TAIR:ATMG00160 PLACE:S000111 | PLACE:S000483 | PLACE:S000414 | PLACE:S000080 | PLACE:S000167 TATABOX4 | SORLIP2AT | ABRELATERD1 | POLASIG1 | MYBPLANT TATATAA | GGGCC | ACGTG | AATAAA | CACCAACC 61 | 95 | 246 | 292.5 | 409.5 PPDB 244950_at longday 0 0.714077 13.223900 8.631490 7.504960 6.893290 7.410370 7.442010 9.220470 6.402710 10.143100 7.506970 6.373850 8.599510 19.163898 0.687139
TAIR:AT2G07723 PLACE:S000414 ABRELATERD1 ACGTG 147 TAIR9 244951_s_at longday 20 0.800001 21.863700 17.000000 10.591900 9.614080 20.957900 21.847400 22.937400 12.795000 20.882500 13.829900 23.459400 19.512400 14.787863 2.373230
TAIR:ATMG00260 PLACE:S000081 | PLACE:S000080 POLASIG2 | POLASIG1 AATTAAA | AATAAA 130 | 147.5 TAIR9 244952_at longday 14 0.416377 4.304400 3.647000 3.938500 4.629570 4.515160 4.103740 4.130470 4.421580 3.700790 3.807590 4.162270 3.742780 10.931117 0.061279
TAIR:ATMG00270 PLACE:S000474 | PLACE:S000507 SITEIIATCYTC | ABRERATCAL TGGGCT | CACGCGG 283.5 | 332 TAIR9 244953_s_at longday 16 0.797530 6.262280 5.344690 6.103310 5.656490 6.501190 5.217500 4.931360 5.506090 5.772280 5.698860 8.571880 5.591720 3.050291 0.326426
TAIR:AT2G07732 PLACE:S000440 CDA1ATCAB2 CAAAACGC 125.5 TAIR9 244954_s_at longday 22 0.698802 6.249040 4.978820 6.160560 5.562290 5.666700 5.997850 5.884450 5.285080 5.598250 5.272740 5.681620 6.433340 21.621359 0.156085
TAIR:ATMG00320 PLACE:S000385 | PLACE:S000474 EVENINGAT | SITEIIATCYTC AAAATATCT | TGGGCT 334 | 453.5 TAIR9 244955_at longday 23 0.446973 3.546640 3.712520 3.550470 3.628370 3.923590 4.149420 3.563380 3.834090 4.009220 3.425800 2.971160 3.579260 20.792485 0.052194
TAIR:AT2G07737 PLACE:S000472 UP2ATMSD AAACCCTA 17.5 TAIR9 244956_s_at longday 22 0.576550 4.605110 5.135530 4.532400 5.297090 5.542660 5.288310 6.018780 6.053600 5.160330 5.193550 4.764220 5.824800 16.670631 0.113874
TAIR:ATMG00400 PLACE:S000477 ANAERO1CONSENSUS AAACAAA 277 TAIR9 244957_at longday 12 0.505032 4.856840 4.978700 5.136060 5.036890 6.121060 4.570940 4.987250 5.250950 5.155880 4.733880 4.506920 4.598260 8.826194 0.077542
TAIR:AT2G07703 PLACE:S000460 | PLACE:S000483 | PLACE:S000483 | PLACE:S000474 CTRMCAMV35S | SORLIP2AT | SORLIP2AT | SITEIIATCYTC TCTCTCTCT | GGGCC | GGGCC | TGGGCC 238 | 292 | 332 | 332.5 TAIR9 244958_at longday 11 0.343738 3.693150 4.024050 3.717170 4.027500 4.449890 3.973870 4.488460 4.120550 4.698530 4.025090 3.521020 4.363840 14.603896 0.023391
TAIR:ATMG00500 PLACE:S000153 LTRECOREATCOR15 CCGAC 31 TAIR9 244959_s_at longday 0 0.620099 37.259400 14.465100 26.154100 10.121300 11.470000 19.476700 24.417900 12.099000 31.468500 14.658400 12.737000 16.969000 20.437031 2.851608
TAIR:ATCG01020 PLACE:S000080 | PLACE:S000111 | PLACE:S000477 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 POLASIG1 | TATABOX4 | ANAERO1CONSENSUS | TATABOX4 | POLASIG1 | POLASIG1 AATAAA | TATATAA | AAACAAA | TATATAA | AATAAA | AATAAA 12.5 | 17 | 311 | 333 | 462.5 | 542.5 TAIR9 244960_at longday 2 0.644830 2892.870000 2563.070000 1989.340000 2263.000000 2755.000000 2227.540000 2521.510000 2702.730000 2347.900000 2348.630000 2265.650000 2477.470000 18.364576 92.856803
TAIR:ATCG01040 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000080 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | POLASIG1 AATAAA | TATAAAT | AAAAATCT | AATAAA 177.5 | 334 | 502.5 | 540.5 TAIR9 244961_at longday 0 0.687086 1459.780000 986.495000 731.238000 982.655000 909.168000 800.420000 946.809000 837.933000 951.237000 824.407000 926.814000 815.717000 18.322510 46.882094
TAIR:ATCG01050 PLACE:S000080 | PLACE:S000149 POLASIG1 | CCA1ATLHCB1 AATAAA | AAAAATCT 19.5 | 458.5 TAIR9 244962_at longday 3 0.803121 2274.390000 2093.430000 2192.620000 1757.350000 1552.100000 2467.160000 2560.280000 2446.350000 3042.120000 2263.680000 1553.360000 2570.120000 20.974618 167.660660
TAIR:ATCG00570 PLACE:S000080 POLASIG1 AATAAA 454.5 TAIR9 244963_at longday 1 0.652676 5348.240000 4955.210000 4632.860000 4611.140000 4785.490000 4784.110000 5238.580000 5111.300000 5733.410000 4406.230000 4745.920000 5456.450000 19.191861 155.346675
TAIR:ATCG00580 PLACE:S000080 | PLACE:S000109 | PLACE:S000149 | PLACE:S000477 POLASIG1 | TATABOX2 | CCA1ATLHCB1 | ANAERO1CONSENSUS AATAAA | TATAAAT | AAAAATCT | AAACAAA 193.5 | 319 | 362.5 | 399 TAIR9 244964_at longday 4 0.617290 1253.030000 1140.580000 1056.140000 988.027000 1114.090000 930.936000 1164.080000 1199.380000 1358.810000 958.611000 1012.590000 1233.240000 15.222782 50.384981
TAIR:ATCG00590 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000063 | PLACE:S000080 | PLACE:S000149 POLASIG1 | POLASIG1 | POLASIG1 | MARABOX1 | POLASIG1 | CCA1ATLHCB1 AATAAA | AATAAA | AATAAA | AATAAATAAA | AATAAA | AAAAATCT 311.5 | 349.5 | 491.5 | 493.5 | 495.5 | 526.5 TAIR9 244965_at longday 0 0.770726 1271.130000 753.579000 500.809000 465.468000 412.303000 684.698000 830.226000 698.347000 885.752000 822.912000 524.407000 592.249000 19.869657 95.909836
TAIR:ATCG00600 - - - - TAIR9 244966_at longday 20 0.868089 181.822000 155.808000 114.969000 165.680000 205.618000 198.895000 207.418000 156.425000 141.974000 119.585000 232.806000 281.506000 13.783155 28.257272
TAIR:ATCG00630 PLACE:S000080 | PLACE:S000111 | PLACE:S000081 | PLACE:S000507 | PLACE:S000477 | PLACE:S000081 POLASIG1 | TATABOX4 | POLASIG2 | ABRERATCAL | ANAERO1CONSENSUS | POLASIG2 AATAAA | TATATAA | AATTAAA | AACGCGC | AAACAAA | AATTAAA 14.5 | 29 | 230 | 380 | 385 | 499 PPDB 244967_at longday 0 0.639122 6430.980000 5795.300000 4098.350000 3708.530000 4703.580000 5151.930000 5079.580000 4758.750000 5633.340000 5378.560000 4902.770000 4724.870000 18.878153 254.177193
TAIR:ATCG00640 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244968_at longday 21 0.841183 3055.580000 2534.890000 1942.030000 2440.550000 2696.360000 2779.520000 3552.580000 2540.030000 2190.750000 2342.810000 2627.010000 3997.670000 15.356530 327.168812
TAIR:ATCG00650 PLACE:S000080 | PLACE:S000080 | PLACE:S000111 | PLACE:S000081 POLASIG1 | POLASIG1 | TATABOX4 | POLASIG2 AATAAA | AATAAA | TATATAA | AATTAAA 26.5 | 272.5 | 287 | 488 PPDB 244969_at longday 20 0.837554 1774.210000 1259.160000 1033.860000 1089.110000 2223.700000 1397.470000 1734.320000 1355.950000 1134.310000 1342.450000 1870.190000 2160.400000 13.504526 224.181301
TAIR:ATCG00660 PLACE:S000081 POLASIG2 AATTAAA 222 TAIR9 244970_at longday 20 0.561870 198.565000 110.103000 66.713700 82.822600 68.678300 97.274600 80.053500 41.890900 117.366000 58.242300 149.829000 95.308100 15.939968 10.542029
TAIR:ATCG00670 PLACE:S000080 | PLACE:S000404 POLASIG1 | CARGATCONSENSUS AATAAA | CCTTTTTAGG 15.5 | 319.5 TAIR9 244971_at longday 0 0.884911 2873.410000 2310.380000 2070.430000 1809.830000 1794.100000 2286.320000 2548.890000 2572.010000 2757.070000 2381.780000 1775.130000 2196.520000 20.662361 186.381750
TAIR:ATCG00680 PLACE:S000404 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000298 CARGATCONSENSUS | POLASIG1 | POLASIG1 | POLASIG1 | PYRIMIDINEBOXHVEPB1 CCTAAAAAGG | AATAAA | AATAAA | AATAAA | TTTTTTCC 9.5 | 222.5 | 247.5 | 259.5 | 323.5 PPDB 244972_at longday 9 0.559083 1252.730000 1065.440000 1242.830000 1592.010000 1460.280000 1376.970000 1593.920000 2434.480000 1960.530000 804.225000 1305.290000 1312.260000 13.826879 101.489429
TAIR:ATCG00690 PLACE:S000483 | PLACE:S000153 SORLIP2AT | LTRECOREATCOR15 GGGCC | CCGAC 331 | 461 PPDB 244973_at longday 21 0.410357 452.449000 416.313000 522.490000 604.341000 1010.440000 680.446000 671.336000 1094.810000 847.238000 341.706000 639.676000 663.445000 21.052811 11.392518
TAIR:ATCG00700 PLACE:S000109 | PLACE:S000153 TATABOX2 | LTRECOREATCOR15 TATAAAT | CCGAC 198 | 459 TAIR9 244974_at longday 13 0.711653 32.090600 30.498700 30.957600 37.616600 48.784800 30.326400 36.521500 42.200200 56.100900 37.286900 34.876100 30.713600 7.850127 2.333562
TAIR:ATCG00710 PLACE:S000477 | PLACE:S000477 ANAERO1CONSENSUS | ANAERO1CONSENSUS AAACAAA | AAACAAA 399 | 410 PPDB 244975_at longday 0 0.458212 2878.130000 2646.830000 2403.560000 2519.020000 3243.340000 2545.120000 2915.560000 3221.250000 3468.280000 2529.190000 2857.400000 3061.360000 18.217644 41.439751
TAIR:ATCG00720 - - - - PPDB 244976_at longday 0 0.497088 6110.500000 6076.040000 5538.770000 5676.610000 6539.750000 5843.680000 6062.500000 6626.190000 7056.240000 5637.330000 6056.630000 6486.390000 19.492582 70.255365
TAIR:ATCG00730 PLACE:S000080 | PLACE:S000080 | PLACE:S000080 | PLACE:S000080 POLASIG1 | POLASIG1 | POLASIG1 | POLASIG1 AATAAA | AATAAA | AATAAA | AATAAA 127.5 | 265.5 | 278.5 | 327.5 PPDB 244977_at longday 16 0.567572 29.537000 24.127500 10.743600 12.695700 14.102200 14.647300 10.980700 11.729900 12.798500 11.958200 49.920700 8.557070 12.255147 2.012785
TAIR:ATCG00740 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 POLASIG1 | POLASIG1 | POLASIG2 AATAAA | AATAAA | AATTAAA 36.5 | 338.5 | 358 PPDB 244978_at longday 0 0.517333 1657.970000 1164.570000 745.655000 1189.310000 1041.780000 930.328000 1289.360000 1450.130000 1594.760000 867.982000 1267.740000 1314.000000 19.283960 87.795522
TAIR:ATCG00750 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244979_at longday 0 0.585937 1526.570000 859.553000 403.556000 737.005000 758.738000 829.247000 825.314000 1241.160000 1315.810000 638.769000 825.052000 1117.900000 18.701319 114.292877
TAIR:ATCG00760 PLACE:S000186 | PLACE:S000080 | PLACE:S000109 | PLACE:S000111 | PLACE:S000111 | PLACE:S000080 | PLACE:S000080 SURE1STPAT21 | POLASIG1 | TATABOX2 | TATABOX4 | TATABOX4 | POLASIG1 | POLASIG1 AATAGAAAA | AATAAA | TATAAAT | TATATAA | TATATAA | AATAAA | AATAAA 246 | 366.5 | 370 | 372 | 393 | 426.5 | 471.5 PPDB 244980_at longday 0 0.673667 733.347000 470.584000 301.299000 396.218000 388.000000 414.165000 434.788000 612.530000 709.110000 327.748000 418.638000 474.929000 20.229047 52.101717
TAIR:ATCG00770 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244981_at longday 0 0.489337 578.477000 283.021000 190.641000 278.496000 293.634000 308.787000 320.148000 351.486000 482.688000 284.571000 379.910000 354.330000 17.693992 25.994498
TAIR:ATCG00780 PLACE:S000111 | PLACE:S000507 | PLACE:S000414 TATABOX4 | ABRERATCAL | ABRELATERD1 TATATAA | AACGCGT | ACGTG 29 | 201 | 265 PPDB 244982_at longday 0 0.752088 569.092000 267.603000 131.079000 191.131000 133.756000 233.042000 298.501000 251.555000 432.886000 263.687000 156.706000 159.257000 20.543793 46.767314
TAIR:ATCG00790 PLACE:S000080 | PLACE:S000080 | PLACE:S000081 | PLACE:S000414 POLASIG1 | POLASIG1 | POLASIG2 | ABRELATERD1 AATAAA | AATAAA | AATTAAA | ACGTG 162.5 | 326.5 | 360 | 540 PPDB 244983_at longday 0 0.805315 2161.660000 1178.050000 520.443000 519.818000 409.469000 965.252000 1240.790000 982.708000 1611.900000 1135.630000 575.161000 640.188000 20.363243 211.916233
TAIR:ATCG00800 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244984_at longday 23 0.586427 2968.790000 2106.250000 1708.300000 1802.640000 3151.180000 2113.860000 2548.370000 2797.090000 2883.350000 2048.490000 2834.580000 3235.240000 21.110764 182.564463
TAIR:ATCG00810 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244985_at longday 20 0.689718 2841.800000 1691.410000 1362.210000 1315.720000 2431.060000 1755.560000 2146.650000 1966.930000 2310.780000 1521.870000 2336.810000 2702.930000 15.364761 214.878171
TAIR:ATCG00820 PLACE:S000111 TATABOX4 TATATAA 448 PPDB 244986_at longday 0 0.598015 2808.240000 1942.700000 1555.640000 1635.120000 2162.770000 1563.630000 2294.570000 3044.330000 2647.780000 1807.240000 2028.490000 2433.910000 19.594872 178.264135
TAIR:ATCG01310 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244987_s_at longday 0 0.684917 6729.090000 5199.880000 5086.150000 4685.620000 5416.480000 5483.700000 5818.550000 6214.860000 6392.040000 5035.610000 5426.640000 5890.200000 18.721945 259.629808
TAIR:ATCG00840 PLACE:S000483 SORLIP2AT GGGCC 524 PPDB 244988_s_at longday 23 0.782418 4953.990000 3808.390000 3335.440000 3638.580000 4151.130000 4619.180000 5087.530000 4118.250000 5070.300000 3325.180000 3517.110000 4306.340000 17.750952 289.519340
TAIR:ATCG01280 - - - - TAIR9 244989_s_at longday 16 0.673767 15.501700 14.089300 10.790300 15.848200 13.847500 13.825300 10.044800 11.216300 13.878300 11.217300 32.430300 12.713300 10.051222 1.889062
TAIR:ATCG01270 PLACE:S000111 TATABOX4 TATATAA 294 TAIR9 244990_s_at longday 16 0.439468 27.202700 35.099900 26.951500 33.459700 22.408300 31.755000 22.533000 27.376500 23.031000 17.897500 50.866800 23.052800 10.746174 1.191164
* Row count is limited to 100.