PromoterCAD

Developmental Coexpression (AtGenExpress Developmental gene expression + ATTED-II promoter motif) Triplicate Data

Full triplicate expression dataset of AtGenExpress plant developmental tissues, combined with CEG coexpression analysis regulatory (7mer) motif calculations (ATTED-II). MotifExpress tool allows the plloting of all triplicate data points during the design process, so the user has some idea of the experimental variation in the measurements.

References (for ATTED-II):
http://www.ncbi.nlm.nih.gov/pubmed/17130150
References (for AtGenExpress)
http://www.ncbi.nlm.nih.gov/pubmed/15806101

Descriptions for each data table:

AtGenExpress_ATTED_Flowering	This collection of Gene Expression Properties are associated with flowering tissues.
AtGenExpress_ATTED_Fruit_Seeds	This collection of Gene Expression Properties are associated with fruit and seed tissues.
AtGenExpress_ATTED_Leaf	This collection of Gene Expression Properties are associated with leaf tissues.
AtGenExpress_ATTED_Root	This collection of Gene Expression Properties are associated with root tissues.
AtGenExpress_ATTED_Seedling	This collection of Gene Expression Properties are associated with seedling tissues.
AtGenExpress_ATTED_Stem	This collection of Gene Expression Properties are associated with stem tissues.
AtGenExpress_ATTED_Whole_Plant	This collection of Gene Expression Properties are associated with whole plant body parts.

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File Name
AtGenExpress_ATTED_Flowering			Action Show Table Data Contents Show API List Show Map Validate RDF Reuse Table Data
Table Data (Text)	2013.4.24	9.7MB
Table Data (Excel)	2013.4.24	15.8MB
RDF (Turtle)	2013.4.24	44.2MB
		その他の形式のAPIリストを表示
AtGenExpress_ATTED_Fruit_Seeds			Action Show Table Data Contents Show API List Show Map Validate RDF Reuse Table Data
Table Data (Text)	2013.4.29	4.2MB
Table Data (Excel)	2013.4.29	6.3MB
RDF (Turtle)	2013.4.29	16.1MB
		その他の形式のAPIリストを表示
AtGenExpress_ATTED_Leaf			Action Show Table Data Contents Show API List Show Map Validate RDF Reuse Table Data
Table Data (Text)	2013.4.24	6.1MB
Table Data (Excel)	2013.4.24	9.6MB
RDF (Turtle)	2013.4.24	25.9MB
		その他の形式のAPIリストを表示
AtGenExpress_ATTED_Root			Action Show Table Data Contents Show API List Show Map Validate RDF Reuse Table Data
Table Data (Text)	2013.4.24	3.7MB
Table Data (Excel)	2013.4.24	5.4MB
RDF (Turtle)	2013.4.24	14.0MB
		その他の形式のAPIリストを表示
AtGenExpress_ATTED_Seedling			Action Show Table Data Contents Show API List Show Map Validate RDF Reuse Table Data
Table Data (Text)	2013.4.24	5.1MB
Table Data (Excel)	2013.4.24	7.9MB
RDF (Turtle)	2013.4.24	21.1MB
		その他の形式のAPIリストを表示
AtGenExpress_ATTED_Stem			Action Show Table Data Contents Show API List Show Map Validate RDF Reuse Table Data
Table Data (Text)	2013.4.24	3.0MB
Table Data (Excel)	2013.4.24	4.2MB
RDF (Turtle)	2013.4.24	10.3MB
		その他の形式のAPIリストを表示
AtGenExpress_ATTED_Whole_Plant			Action Show Table Data Contents Show API List Show Map Validate RDF Reuse Table Data
Table Data (Text)	2013.4.24	3.0MB
Table Data (Excel)	2013.4.24	4.2MB
RDF (Turtle)	2013.4.24	10.3MB
		その他の形式のAPIリストを表示

Web Search

Contributor Send Message	Koro_Nishikata
Collaborators	Robert_Cox
Website	http://atted.jp/ http://arabidopsis.org/servlets/TairOb...
Reference	http://www.ncbi.nlm.nih.gov/pubmed/171... http://www.ncbi.nlm.nih.gov/pubmed/158...
Total downloads	1391
Created date	Apr 24, 2013
Last update date	May 1, 2013

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Developmental Coexpression (AtGenExpress Developmental gene expression + ATTED-II promoter motif) Triplicate Data

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