#LINK | ||||||
#lang | en | |||||
#attribution_name | GenoCon | |||||
#attribution_url | http://promotercad.org | |||||
#license | http://creativecommons.org/licenses/by/3.0/deed.ja | |||||
#file_name | GeneAtlas_samples | |||||
#download_from | http://linkdata.org/work/rdf1s915i | |||||
#namespace | CL | http://www.ontobee.org/browser/rdf.php?o=CL&iri=http://purl.obolibrary.org/obo/CL_ | ||||
#namespace | UBERON | http://www.ontobee.org/browser/rdf.php?o=CL&iri=http://purl.obolibrary.org/obo/UBERON_ | ||||
#property | Sample Type | Gender | Replicate Type | RNA Amount (ng) | Amplification Type | CL ontology |
#object_type_xsd | string | string | string | float | string | string |
#property_context | Assertion | Assertion | Assertion | Assertion | Assertion | Assertion |
1 | BMM unstimulated | male | experimental | 2000 | single | CL:0002476 |
2 | BMM 2hr LPS | male | experimental | 2000 | single | CL:0002476 |
3 | BMM 6hr LPS | male | experimental | 2000 | single | CL:0002476 |
4 | BMM 24hr LPS | male | experimental | 2000 | single | CL:0002476 |
5 | RAW 264.7 | unknown | technical | 2000 | single | |
6 | TEPM unstimulated | male | technical | 2000 | single | CL:0000581 |
7 | TEPM 1hr LPS | male | technical | 2000 | single | CL:0000581 |
8 | TEPM 7hr LPS | male | technical | 2000 | single | CL:0000581 |
9 | Bone | male | experimental | 2000 | single | CL:0001035 |
10 | Bone marrow | male | experimental | 2000 | single | CL:0002092 |
11 | Microglia | male | experimental | 1000 | single | CL:0000129 |
12 | Osteoclasts | male | experimental | 2000 | single | CL:0000062 |
13 | Osteoblast day5 | male | experimental | 2000 | single | CL:0000062 |
14 | Osteoblast day14 | male | experimental | 2000 | single | CL:0000062 |
15 | Osteoblast day21 | male | experimental | 2000 | single | CL:0000062 |
16 | Mast cells | male | experimental | 100 | double | CL:0000097 |
17 | Mast cells IgE | male | experimental | 100 | double | CL:0000097 |
18 | Mast cells IgE+antigen 1hr | male | experimental | 100 | double | CL:0000097 |
19 | Mast cells IgE+antigen 6hr | male | experimental | 100 | double | CL:0000097 |
20 | B-cells marginal zone | male | technical | 100 | double | CL:0000845 |
21 | Follicular B-cells | male | experimental | 2000 | single | CL:0000843 |
22 | NK cells | male | experimental | 100 | double | CL:0000623 |
23 | T-cells CD4+ | male | technical | 100 | double | CL:0000084 |
24 | T-cells CD8+ | male | technical | 100 | double | CL:0000084 |
25 | T-cells foxP3+ | male | experimental | 100 | double | CL:0000084 |
26 | Dendritic cells lymphoid CD8a+ | male | technical | 100 | double | CL:0000451 |
27 | Dendritic cells myeloid CD8a- | male | technical | 100 | double | CL:0000451 |
28 | Dendritic plasmacytoid B220+ | male | technical | 100 | double | CL:0000451 |
29 | Common myeloid progenitor | male | experimental | 100 | double | |
30 | Granulo-mono progenitor | male | experimental | 100 | double | |
31 | Granulocytes_mac1+gr1+ | male | experimental | 100 | double | CL:0000094 |
32 | Mega erythrocyte progenitor | male | experimental | 100 | double | |
33 | Thymocyte DP CD4+CD8+ | male | technical | 100 | double | CL:0000893 |
34 | Thymocyte SP CD4+ | male | technical | 100 | double | CL:0000893 |
35 | Thymocyte SP CD8+ | male | technical | 50 | double | CL:0000893 |
36 | Stem cells | male | experimental | 100 | double | CL:0000034 |
37 | Embryonic stem line Bruce4 p13 | unknown | technical | 2000 | single | CL:0002322 |
38 | Embryonic stem line V26 2 p16 | unknown | technical | 2000 | single | CL:0002322 |
39 | Adipose brown | male | experimental | 2000 | single | |
40 | Adipose white | male | experimental | 2000 | single | |
41 | Bladder | male | experimental | 2000 | single | CL:1001319 |
42 | Epidermis | male | experimental | 2000 | single | UBERON:0001003 |
43 | Heart | male | experimental | 2000 | single | UBERON:0000948 |
44 | Intestine large | male | experimental | 2000 | single | UBERON:0000059 |
45 | Intestine small | male | experimental | 2000 | single | UBERON:0002108 |
46 | Kidney | male | experimental | 2000 | single | UBERON:0002113 |
47 | Lacrimal gland | male | experimental | 2000 | single | |
48 | Liver | male | experimental | 2000 | single | UBERON:0002107 |
49 | Lung | male | experimental | 2000 | single | UBERON:0002048 |
50 | Lymph nodes | male | experimental | 2000 | single | UBERON:0000029 |
51 | Mammary gland lact | female | experimental | 2000 | single | UBERON:0001911 |
52 | Mammary gland non-lactating | female | technical | 2000 | single | UBERON:0001911 |
53 | Ovary | female | experimental | 2000 | single | |
54 | Pancreas | male | experimental | 2000 | single | UBERON:0001264 |
55 | Pituitary | male | experimental | 2000 | single | |
56 | Placenta | female | experimental | 2000 | single | UBERON:0001987 |
57 | Prostate | male | experimental | 2000 | single | |
58 | Salivary gland | male | experimental | 2000 | single | UBERON:0001044 |
59 | Skeletal muscle | male | experimental | 2000 | single | CL:0000188 |
60 | Spleen | male | experimental | 2000 | single | UBERON:0002106 |
61 | Stomach | male | experimental | 2000 | single | UBERON:0000945 |
62 | Testis | male | experimental | 2000 | single | UBERON:0000473 |
63 | Umbilical cord | female | experimental | 2000 | single | UBERON:0002331 |
64 | Uterus | female | experimental | 2000 | single | UBERON:0000995 |
65 | Iris | male | experimental | 100 | double | UBERON:0001769 |
66 | Cornea | male | technical | 100 | double | UBERON:0000964 |
67 | Eyecup | male | technical | 100 | double | UBERON:0003072 |
68 | Lens | male | technical | 100 | double | |
69 | Retina | male | technical | 100 | double | UBERON:0000966 |
70 | Retinal pigment epithelium | male | experimental | 100 | double | CL:0002586 |
71 | Olfactory bulb | male | experimental | 2000 | single | UBERON:0002264 |
72 | Adrenal gland | male | experimental | 2000 | single | UBERON:0002369 |
73 | amygdala | male | experimental | 2000 | single | |
74 | cerebellum | male | experimental | 2000 | single | UBERON:0002037 |
75 | Cerebral cortex | male | experimental | 2000 | single | UBERON:0000956 |
76 | Cerebral cortex prefrontal | male | experimental | 2000 | single | UBERON:0000956 |
77 | Dorsal root ganglia | male | experimental | 2000 | single | UBERON:0000044 |
78 | Dorsal striatum | male | experimental | 2000 | single | |
79 | Ciliary bodies | male | technical | 100 | double | UBERON:0001775 |
80 | Hippocampus | male | experimental | 2000 | single | |
81 | Hypothalamus | male | experimental | 2000 | single | UBERON:0001898 |
82 | Neuro2a | unknown | technical | 2000 | single | |
83 | Nucleus_accumbens | male | experimental | 2000 | single | |
84 | Spinal cord | male | experimental | 2000 | single | UBERON:0002240 |
85 | 3T3-L1 | unknown | technical | 2000 | single | |
86 | Baf3 | unknown | technical | 2000 | single | |
87 | C2C12 | unknown | technical | 2000 | single | |
88 | C3H 10T1 2 | unknown | technical | 2000 | single |