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PromoterCAD template files for adding regulatory motif data

These template files are useful if you would like to add new data to PromoterCAD, such as for a new organisms, experimental measurements, or motif identification methods.

Tutorial Page:
Advanced Tutorial 2B: add a new motif database to PromoterCAD
PromoterCAD Web Server:
http://promotercad.org
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://atted.jp/download.shtml
#license http://creativecommons.org/publicdomain/zero/1.0/deed.ja
#file_name PromoterCAD_AtGenExpress_mean_Stem_Template
#download_from http://linkdata.org/work/rdf1s921i
#namespace TAIR http://www.arabidopsis.org/servlets/TairObject?type=locus&name=
#property motif motif name motif sequence motif position label:Col-0_lf7_petio label:Col-0_stem_2nd label:Col-0_stem_1st
#object_type_xsd string string string float string string string
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion
TAIR:At1g67790 0.3594 0.1964 0.4680
TAIR:At1g67760 0.1504 -0.1768 -0.1612
TAIR:At1g67710 1.2499 0.8320 1.0234
TAIR:At1g67680 -0.0511 -0.1076 -0.0784
TAIR:At1g67660 0.7178 -0.7904 -0.3530
TAIR:At1g67670 -0.0182 -0.0183 0.0366
TAIR:At1g67690 -0.1905 -0.9199 -0.4127
TAIR:At1g67770 -0.0990 -0.3070 -0.2241
TAIR:At1g67780 -0.1039 -0.1530 -0.0832
TAIR:At1g67810 0.5263 1.0001 -0.7806
TAIR:At1g67820 -0.7437 0.2813 0.3241
TAIR:At1g67740 1.3652 0.9566 0.6985
TAIR:At1g67750 0.5630 0.2094 1.9388
TAIR:At1g67800 -0.2061 0.2975 -0.6832
TAIR:At1g67700 1.0123 0.2744 0.2478
TAIR:At1g67730 -0.8353 -0.2142 -0.4167
TAIR:At1g67850 -0.0406 -0.6889 -0.0097
TAIR:At1g67840 0.5549 0.3999 0.3848
TAIR:At1g67720 0.2261 -0.3381 0.8392
TAIR:At1g44254 -0.0005 0.0233 -0.1068
TAIR:At1g44575 0.8650 0.0546 0.4553
TAIR:At1g67855 -0.0674 0.0546 -0.0591
TAIR:At1g67830 0.0701 -0.6188 -0.0310
TAIR:At1g38340 -0.1214 -0.0727 -0.1626
TAIR:At1g58842 0.4107 0.7347 0.4672
TAIR:At1g59124 0.4275 0.8212 0.6196
TAIR:At1g59171 0.0064 0.0989 -0.0281
TAIR:At1g59265 0.0685 0.0726 -0.1874
TAIR:At1g44510 -0.1135 -0.0295 -0.0475
TAIR:At1g44478 -0.0196 0.2458 -0.0807
TAIR:At1g44446 0.7412 1.3303 0.2412
TAIR:At1g44414 0.0800 0.0769 -0.0404
TAIR:At1g44350 0.6480 -0.4129 0.2955
TAIR:At1g44318 0.0331 0.0054 -0.2878
TAIR:At1g44222 -0.4627 -0.5710 -0.3326
TAIR:At1g56700 -0.0789 0.8791 0.3653
TAIR:At1g56600 -0.6462 4.1061 0.2708
TAIR:At1g56650 -0.4669 -0.6175 -0.0845
TAIR:At1g56580 -0.9323 -0.9297 -0.8580
TAIR:At1g25360 -0.2236 -0.3648 -0.2923
TAIR:At1g25350 -0.1794 -0.5610 -0.2664
TAIR:At1g25290 -0.0117 -0.0000 -0.1762
TAIR:At1g25280 -0.1765 0.1363 0.0900
TAIR:At1g25270 -0.2538 -0.3682 -0.4231
TAIR:At1g25250 0.4812 1.2995 1.2292
TAIR:At1g25240 -0.5331 -0.5512 -0.5825
TAIR:At1g25230 2.0509 1.8373 1.4662
TAIR:At1g24996 0.8236 0.7592 -0.6482
TAIR:At1g25260 -0.2316 -0.7079 -0.3776
TAIR:At1g25330 -0.8533 -0.9194 -0.7417
TAIR:At1g25370 0.2340 0.1185 0.3015
TAIR:At1g25275 1.0551 0.6330 0.6510
TAIR:At1g25340 -0.3914 -0.1353 -0.0893
TAIR:At1g25320 -0.1846 -0.1623 0.7647
TAIR:At1g24764 0.4061 0.7740 0.9684
TAIR:At1g25025 -0.1395 -0.2706 -0.2451
TAIR:At1g24678 0.0767 0.0891 -0.1875
TAIR:At1g24938 -0.0980 -0.1665 -0.0381
TAIR:At1g24706 -0.3428 -0.0578 -0.4030
TAIR:At1g24735 0.8467 -0.1537 0.0531
TAIR:At1g24793 -0.4871 -0.2207 -0.1479
TAIR:At1g56540 0.1096 0.1666 0.0048
TAIR:At1g56530 -0.0023 -0.0226 -0.1033
TAIR:At1g56620 -0.0640 -0.1213 -0.0272
TAIR:At1g56720 0.6502 3.1986 2.2059
TAIR:At1g28270 -1.2732 -0.9499 -1.2505
TAIR:At1g28260 0.1900 0.8888 0.2709
TAIR:At1g28240 0.3563 0.6712 0.5214
TAIR:At1g28220 0.0037 -0.0712 -0.2817
TAIR:At1g28190 -0.0794 -0.4458 0.0456
TAIR:At1g28170 -0.2427 -0.2048 -0.2732
TAIR:At1g28327 -0.0035 0.0202 -0.0001
TAIR:At1g28250 -0.1122 0.3814 -0.2600
TAIR:At1g28280 0.0113 0.5320 0.3531
TAIR:At1g28200 -0.1678 0.6039 0.4103
TAIR:At1g28330 -0.0173 2.1553 0.5739
TAIR:At1g28300 -0.2022 -0.2383 -0.3100
TAIR:At1g28210 -0.2042 -0.5241 -0.4340
TAIR:At1g28230 -0.2424 0.6878 -1.1620
TAIR:At1g56710 -0.1150 -0.1193 -0.3412
TAIR:At1g56690 -0.0817 -0.5108 -0.1472
TAIR:At1g56680 -0.6418 -0.5142 -0.5128
TAIR:At1g56675 0.1874 -0.0150 -0.2225
TAIR:At1g56670 0.0334 -0.2371 1.5270
TAIR:At1g56660 0.8803 0.8393 0.7446
TAIR:At1g56610 -0.1216 1.1523 0.4491
TAIR:At1g56590 -0.0073 0.2495 0.1327
TAIR:At1g56570 0.1260 -0.3951 -0.3157
TAIR:At1g56560 -0.2626 0.2048 -0.0590
* Row count is limited to 100.