Contact

Link and Publish your data

to the Linked Open Data Community

Linkdata Work Information

PromoterCAD template files for adding regulatory motif data

These template files are useful if you would like to add new data to PromoterCAD, such as for a new organisms, experimental measurements, or motif identification methods.

Tutorial Page:
Advanced Tutorial 2B: add a new motif database to PromoterCAD
PromoterCAD Web Server:
http://promotercad.org
0

value

useful
0
Loading...



Select a file name to see the detais.
   
#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://atted.jp/download.shtml
#license http://creativecommons.org/publicdomain/zero/1.0/deed.ja
#file_name PromoterCAD_AtGenExpress_mean_Whole_Plant_Template
#download_from http://linkdata.org/work/rdf1s921i
#namespace TAIR http://www.arabidopsis.org/servlets/TairObject?type=locus&name=
#property motif motif name motif sequence motif position label:Col-0_whole21d label:Col-0_whole22d label:Col-0_whole23d
#object_type_xsd string string string float string string string
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion
TAIR:At1g67790 0.0268 0.1149 0.0786
TAIR:At1g67760 0.0421 0.1672 -0.0771
TAIR:At1g67710 0.0835 0.0899 0.1388
TAIR:At1g67680 -0.3274 -0.2084 -0.3417
TAIR:At1g67660 0.6517 0.6258 0.5416
TAIR:At1g67670 0.0340 -0.0314 -0.0845
TAIR:At1g67690 -0.2254 -0.1124 -0.0648
TAIR:At1g67770 -0.0344 -0.2578 -0.2114
TAIR:At1g67780 -0.1001 -0.1388 -0.0888
TAIR:At1g67810 0.5423 0.0866 0.6973
TAIR:At1g67820 -0.5501 -0.5467 -0.4663
TAIR:At1g67740 1.3859 1.6425 1.3977
TAIR:At1g67750 0.1433 0.5914 0.3740
TAIR:At1g67800 0.8119 0.8518 1.2510
TAIR:At1g67700 1.2738 1.3617 1.1251
TAIR:At1g67730 -0.6920 -0.4623 -0.4404
TAIR:At1g67850 0.1037 0.0128 0.3015
TAIR:At1g67840 0.7319 0.9203 1.0570
TAIR:At1g67720 -0.0406 -0.2514 0.1044
TAIR:At1g44254 0.0996 -0.1157 -0.1173
TAIR:At1g44575 0.9747 0.9918 0.8745
TAIR:At1g67855 -0.1491 -0.1277 -0.0488
TAIR:At1g67830 -0.0005 0.0687 -0.0274
TAIR:At1g38340 -0.0468 0.0480 -0.0325
TAIR:At1g58842 0.7359 0.7264 0.8380
TAIR:At1g59124 0.8103 0.8247 1.0048
TAIR:At1g59171 -0.0531 -0.0061 -0.0520
TAIR:At1g59265 -0.0748 -0.0779 -0.0048
TAIR:At1g44510 0.0055 0.0808 -0.0632
TAIR:At1g44478 0.0385 0.0206 -0.1044
TAIR:At1g44446 0.9083 1.8196 1.4426
TAIR:At1g44414 0.0159 0.0824 0.0026
TAIR:At1g44350 0.2158 -0.6751 -1.1220
TAIR:At1g44318 0.0890 -0.0055 -0.0180
TAIR:At1g44222 -0.4219 -0.3632 -0.3282
TAIR:At1g56700 -0.3433 -0.1310 -0.1807
TAIR:At1g56600 0.8357 1.9126 2.3500
TAIR:At1g56650 -0.3292 -0.2463 -0.1971
TAIR:At1g56580 -0.2187 0.0159 0.0115
TAIR:At1g25360 -0.1373 -0.0142 -0.1399
TAIR:At1g25350 -0.2555 -0.2498 -0.2820
TAIR:At1g25290 0.1468 0.0324 0.0634
TAIR:At1g25280 -0.2798 -0.2646 -0.2634
TAIR:At1g25270 -0.1698 -0.4011 -0.1848
TAIR:At1g25250 0.0204 0.0662 0.0026
TAIR:At1g25240 -0.4726 -0.5679 -0.5155
TAIR:At1g25230 0.7526 0.7152 0.6336
TAIR:At1g24996 0.2820 0.1650 0.2844
TAIR:At1g25260 -0.1352 -0.0717 -0.0905
TAIR:At1g25330 -0.7920 -0.9059 -0.7977
TAIR:At1g25370 0.1598 -0.2248 -0.1913
TAIR:At1g25275 0.8114 0.4445 0.7358
TAIR:At1g25340 -0.2505 -0.0490 -0.1686
TAIR:At1g25320 -0.4218 -0.4169 -0.3536
TAIR:At1g24764 -0.1626 -0.0309 -0.0986
TAIR:At1g25025 -0.1262 -0.1919 -0.2780
TAIR:At1g24678 0.0893 0.1637 0.1287
TAIR:At1g24938 -0.1682 0.1118 -0.0460
TAIR:At1g24706 -0.2795 -0.1168 0.0837
TAIR:At1g24735 0.0200 -0.0607 -0.0943
TAIR:At1g24793 -0.4749 -0.2804 -0.2149
TAIR:At1g56540 0.5209 -0.0806 0.0643
TAIR:At1g56530 0.0532 0.0106 0.0268
TAIR:At1g56620 0.0748 -0.0539 0.0068
TAIR:At1g56720 -0.2745 -0.2622 -0.3794
TAIR:At1g28270 -1.0264 -1.0433 -1.0731
TAIR:At1g28260 -0.1375 -0.0661 0.1527
TAIR:At1g28240 0.3256 0.0274 0.3580
TAIR:At1g28220 -0.0444 0.0974 0.0591
TAIR:At1g28190 0.4307 -0.3853 -0.0984
TAIR:At1g28170 -0.0060 -0.0334 -0.1786
TAIR:At1g28327 -0.0237 0.0179 -0.0056
TAIR:At1g28250 -0.1156 -0.1659 -0.2163
TAIR:At1g28280 0.0852 -0.1726 -0.1448
TAIR:At1g28200 -0.1874 -0.1871 -0.2649
TAIR:At1g28330 0.0892 -0.6081 -0.4492
TAIR:At1g28300 -0.1866 -0.0567 -0.1074
TAIR:At1g28210 -0.3054 -0.3467 -0.3119
TAIR:At1g28230 0.0633 0.2055 0.4370
TAIR:At1g56710 -0.0299 0.0256 0.0874
TAIR:At1g56690 -0.2402 -0.0827 -0.0342
TAIR:At1g56680 -0.3392 -0.3099 -0.2559
TAIR:At1g56675 0.1595 -0.0052 0.0889
TAIR:At1g56670 0.1460 0.5430 0.4107
TAIR:At1g56660 1.3352 -0.2604 -0.2260
TAIR:At1g56610 -0.0295 0.1404 0.3403
TAIR:At1g56590 -0.1166 0.0654 -0.0414
TAIR:At1g56570 0.0360 -0.0422 -0.0977
TAIR:At1g56560 -0.1889 -0.0099 0.0183
* Row count is limited to 100.