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PromoterCAD template files for adding regulatory motif data

These template files are useful if you would like to add new data to PromoterCAD, such as for a new organisms, experimental measurements, or motif identification methods.

Tutorial Page:
Advanced Tutorial 2B: add a new motif database to PromoterCAD
PromoterCAD Web Server:
http://promotercad.org
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#LINK
#lang en
#attribution_name GenoCon
#attribution_url http://atted.jp/download.shtml
#license http://creativecommons.org/publicdomain/zero/1.0/deed.ja
#file_name PromoterCAD_AtGenExpress_median_Whole_Plant_Template
#download_from http://linkdata.org/work/rdf1s921i
#namespace TAIR http://www.arabidopsis.org/servlets/TairObject?type=locus&name=
#property motif motif name motif sequence motif position label:Col-0_whole21d label:Col-0_whole22d label:Col-0_whole23d
#object_type_xsd string string string float string string string
#property_context Assertion Assertion Assertion Assertion Assertion Assertion Assertion
TAIR:At1g67790 0.0320 0.1302 0.0782
TAIR:At1g67760 0.0122 0.1672 -0.1079
TAIR:At1g67710 0.0646 0.0876 0.0005
TAIR:At1g67680 -0.2306 -0.1375 -0.3264
TAIR:At1g67660 0.6648 0.6363 0.4831
TAIR:At1g67670 -0.0410 0.0111 -0.1342
TAIR:At1g67690 -0.2355 -0.1095 -0.0347
TAIR:At1g67770 -0.0697 -0.2381 -0.2817
TAIR:At1g67780 -0.0724 -0.1273 -0.0542
TAIR:At1g67810 0.5613 -0.0659 0.5112
TAIR:At1g67820 -0.5386 -0.5934 -0.4415
TAIR:At1g67740 1.3879 1.6443 1.3813
TAIR:At1g67750 -0.0088 0.5955 0.4892
TAIR:At1g67800 0.8520 0.9372 1.3441
TAIR:At1g67700 1.3007 1.3260 1.1255
TAIR:At1g67730 -0.7912 -0.4901 -0.4338
TAIR:At1g67850 0.1656 0.0452 0.3263
TAIR:At1g67840 0.7233 0.9398 0.9711
TAIR:At1g67720 -0.0596 -0.2026 0.1583
TAIR:At1g44254 0.1353 -0.0556 -0.2104
TAIR:At1g44575 1.0183 0.9888 0.8955
TAIR:At1g67855 -0.1431 -0.1100 -0.0665
TAIR:At1g67830 -0.0877 0.0129 -0.1089
TAIR:At1g38340 -0.0136 -0.0078 -0.0558
TAIR:At1g58842 0.7880 0.7301 0.7662
TAIR:At1g59124 0.8221 0.8205 0.9810
TAIR:At1g59171 -0.0597 -0.0418 -0.0500
TAIR:At1g59265 -0.0969 -0.0604 0.0035
TAIR:At1g44510 0.0278 0.0315 -0.0828
TAIR:At1g44478 0.0587 -0.0362 -0.1060
TAIR:At1g44446 0.8562 1.8527 1.1379
TAIR:At1g44414 0.0155 0.0726 -0.0195
TAIR:At1g44350 0.3892 -0.7289 -1.0593
TAIR:At1g44318 -0.0552 -0.0684 -0.0964
TAIR:At1g44222 -0.5105 -0.3845 -0.3577
TAIR:At1g56700 -0.3499 -0.1159 -0.1890
TAIR:At1g56600 0.8051 2.0505 2.4878
TAIR:At1g56650 -0.4225 -0.2689 -0.1985
TAIR:At1g56580 -0.2431 -0.0347 0.1425
TAIR:At1g25360 -0.1689 -0.0295 -0.1306
TAIR:At1g25350 -0.2776 -0.2516 -0.2678
TAIR:At1g25290 0.0932 -0.0314 0.0940
TAIR:At1g25280 -0.2091 -0.2847 -0.2452
TAIR:At1g25270 -0.1805 -0.3291 -0.1815
TAIR:At1g25250 0.0212 0.1075 -0.0001
TAIR:At1g25240 -0.4390 -0.5688 -0.5370
TAIR:At1g25230 0.6680 0.6054 0.5997
TAIR:At1g24996 0.0962 0.1221 0.2941
TAIR:At1g25260 -0.2001 -0.0809 -0.0816
TAIR:At1g25330 -0.8192 -0.9259 -0.7349
TAIR:At1g25370 0.1427 -0.1480 -0.1387
TAIR:At1g25275 0.8266 0.4741 0.6910
TAIR:At1g25340 -0.2179 -0.0622 -0.1531
TAIR:At1g25320 -0.5931 -0.4627 -0.4290
TAIR:At1g24764 -0.0986 -0.0405 -0.0569
TAIR:At1g25025 -0.0927 -0.2360 -0.2637
TAIR:At1g24678 0.2424 0.1683 0.0164
TAIR:At1g24938 -0.1990 0.0459 -0.0646
TAIR:At1g24706 -0.3723 -0.1280 0.0379
TAIR:At1g24735 0.0248 -0.0719 -0.1578
TAIR:At1g24793 -0.4426 -0.2422 -0.1753
TAIR:At1g56540 0.5224 -0.0881 0.0546
TAIR:At1g56530 0.0646 0.0335 0.0311
TAIR:At1g56620 0.1184 -0.0508 0.0594
TAIR:At1g56720 -0.4909 -0.3297 -0.5422
TAIR:At1g28270 -1.0510 -1.0920 -1.0601
TAIR:At1g28260 -0.1461 -0.0472 0.1975
TAIR:At1g28240 0.3261 0.0022 0.2903
TAIR:At1g28220 -0.0143 -0.0302 0.0367
TAIR:At1g28190 0.5610 -0.3793 0.0053
TAIR:At1g28170 0.0814 -0.0115 -0.2284
TAIR:At1g28327 -0.0270 -0.0127 0.0280
TAIR:At1g28250 -0.1653 -0.1892 -0.2546
TAIR:At1g28280 0.0885 -0.2088 -0.1325
TAIR:At1g28200 -0.1842 -0.1824 -0.2807
TAIR:At1g28330 0.0229 -0.7786 -0.4789
TAIR:At1g28300 -0.2916 -0.1565 -0.1534
TAIR:At1g28210 -0.2789 -0.3665 -0.3276
TAIR:At1g28230 0.1779 0.1401 0.3692
TAIR:At1g56710 -0.0699 0.0205 0.1114
TAIR:At1g56690 -0.2536 -0.0795 -0.0122
TAIR:At1g56680 -0.3318 -0.2754 -0.2454
TAIR:At1g56675 0.1838 -0.0084 0.1127
TAIR:At1g56670 0.0910 0.5970 0.3703
TAIR:At1g56660 1.4838 -0.2707 -0.2301
TAIR:At1g56610 0.0053 0.1352 0.2462
TAIR:At1g56590 -0.1157 0.0659 -0.0440
TAIR:At1g56570 0.0341 -0.0413 -0.0781
TAIR:At1g56560 -0.1926 -0.0232 -0.0052
* Row count is limited to 100.